Gene: Solyc02g093340.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g093340.3
  • Transcript Identifier Solyc02g093340.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 52296454-52299630 : positive

Gene Family Information

  • ID HOM05D000285
  • #Genes/#Species 1537/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g093340.3.1
  • uniprot A0A3Q7FDP2
  • gene_id Solyc02g093340

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* Q9FM47_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048576
ISO
PLAZA Integrative Orthologypositive regulation of short-day photoperiodism, flowering AT5G40490
GO:0048578
ISO
PLAZA Integrative Orthologypositive regulation of long-day photoperiodism, flowering AT5G40490
GO:0006378
ISO
PLAZA Integrative OrthologymRNA polyadenylation AT5G40490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0097157
ISO
PLAZA Integrative Orthologypre-mRNA intronic binding AT5G40490
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G40490
GO:0003730
ISO
PLAZA Integrative OrthologymRNA 3'-UTR binding AT5G40490

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G40490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated