Gene: Solyc02g091720.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g091720.2
  • Transcript Identifier Solyc02g091720.2.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 51000886-51002046 : negative

Gene Family Information

  • ID HOM05D002845
  • #Genes/#Species 243/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g091720.2.1
  • uniprot A0A3Q7FAZ5
  • gene_id Solyc02g091720

Descriptions

  • Description protein RMD5 homolog A (AHRD V3.3 *** A0A2I4DW83_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
IBA
IEA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IBA
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G37880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0034657
IBA
GOA DatabaseGID complex
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027370 RING-type zinc-finger, LisH dimerisation motif
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR037683 Rmd5, degenerated RING (dRING) finger
IPR045098 Fyv10 family
IPR001841 Zinc finger, RING-type
IPR013144 CRA domain
IPR024964 CTLH/CRA C-terminal to LisH motif domain
IPR006595 CTLH, C-terminal LisH motif
Mapman id Description
19.2.1.3.1.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.ubiquitin ligase component GID2