Gene: Solyc02g087880.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g087880.3
  • Transcript Identifier Solyc02g087880.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 48185886-48187525 : positive

Gene Family Information

  • ID HOM05D000349
  • #Genes/#Species 1356/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g087880.3.1
  • uniprot A0A3Q7F8W6
  • gene_id Solyc02g087880

Descriptions

  • Description Tubulin alpha chain (AHRD V3.3 *** A0A1U8FRN4_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007017
IEA
GOA Databasemicrotubule-based process
GO:0007017
IEA
InterPromicrotubule-based process
GO:0071258
ISO
PLAZA Integrative Orthologycellular response to gravity AT5G19770
GO:0000278
IBA
GOA Databasemitotic cell cycle
GO:0000226
IBA
GOA Databasemicrotubule cytoskeleton organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005200
IBA
IEA
GOA Databasestructural constituent of cytoskeleton
GO:0005200
IEA
InterProstructural constituent of cytoskeleton
GO:0005525
IBA
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005874
IBA
IEA
GOA Databasemicrotubule
GO:0005874
IEA
InterPromicrotubule

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023123 Tubulin, C-terminal
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR008280 Tubulin/FtsZ, C-terminal
IPR003008 Tubulin/FtsZ, GTPase domain
IPR036525 Tubulin/FtsZ, GTPase domain superfamily
IPR002452 Alpha tubulin
IPR000217 Tubulin
IPR037103 Tubulin/FtsZ-like, C-terminal domain
Mapman id Description
20.1.1.1 Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component alpha-Tubulin