Gene: Solyc02g081010.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g081010.3
  • Transcript Identifier Solyc02g081010.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 43056021-43060877 : negative

Gene Family Information

  • ID HOM05D000451
  • #Genes/#Species 1160/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g081010.3.1
  • uniprot A0A3Q7FSG9
  • gene_id Solyc02g081010

Descriptions

  • Description Lysine-specific demethylase JMJ25 (AHRD V3.3 *** A0A2G3A990_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033169
IBA
IEA
GOA Databasehistone H3-K9 demethylation
GO:0033169
IEA
InterProhistone H3-K9 demethylation
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:2000039
ISO
PLAZA Integrative Orthologyregulation of trichome morphogenesis AT1G62310
GO:0051567
ISO
PLAZA Integrative Orthologyhistone H3-K9 methylation AT1G62310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032454
IBA
IEA
GOA Databasehistone demethylase activity (H3-K9 specific)
GO:0032454
IEA
InterProhistone demethylase activity (H3-K9 specific)
GO:0003712
IBA
GOA Databasetranscription coregulator activity
GO:0031490
IBA
GOA Databasechromatin DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0000118
IBA
GOA Databasehistone deacetylase complex
GO:0000785
IBA
GOA Databasechromatin

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045109 Histone demethylase JHDM2-like
IPR003347 JmjC domain
IPR018866 Zinc-finger domain of monoamine-oxidase A repressor R1
Mapman id Description
12.3.3.8.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM3)