Gene: Solyc02g021360.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g021360.3
  • Transcript Identifier Solyc02g021360.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 20913011-20930685 : negative

Gene Family Information

  • ID HOM05D001771
  • #Genes/#Species 368/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g021360.3.1
  • uniprot A0A3Q7EW96
  • gene_id Solyc02g021360

Descriptions

  • Description Katanin p80 WD40 repeat-containing subunit B1 homolog (AHRD V3.3 *** A0A2G3D2K6_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051013
IEA
GOA Databasemicrotubule severing
GO:0007019
IBA
GOA Databasemicrotubule depolymerization
GO:0051510
ISO
PLAZA Integrative Orthologyregulation of unidimensional cell growth AT5G08390
GO:0043622
ISO
PLAZA Integrative Orthologycortical microtubule organization AT5G08390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008017
IEA
GOA Databasemicrotubule binding
GO:0008017
IEA
InterPromicrotubule binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005874
IEA
GOA Databasemicrotubule
GO:0008352
IBA
IEA
GOA Databasekatanin complex
GO:0015630
ISO
PLAZA Integrative Orthologymicrotubule cytoskeleton AT5G08390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR028021 Katanin p80 subunit, C-terminal
Mapman id Description
13.4.4.2.2 Cell cycle organisation.cytokinesis.phragmoplast disassembly.Katanin ATP-dependent microtubule severing complex.regulatory component