Gene: Solyc01g103980.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g103980.4
- Transcript Identifier Solyc01g103980.4.1
- Gene Type Coding gene
- Location SL4.0ch01 : 84763954-84767085 : positive
Gene Family Information
- ID HOM05D002874
- #Genes/#Species 241/93
- Phylogenetic origin
- ID ORTHO05D003250
- #Genes/#Species 235/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc01g103980.4.1
- uniprot A0A3Q7ERP2
- gene_id Solyc01g103980
Descriptions
- Description E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) (AHRD V3.3 *** Q93WJ5_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | GOA Database | protein ubiquitination | |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT4G33940 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061630 | IEA | GOA Database | ubiquitin protein ligase activity | |
| GO:0061630 | IEA | InterPro | ubiquitin protein ligase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |