Gene: Solyc01g100400.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g100400.3
  • Transcript Identifier Solyc01g100400.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 82705682-82707186 : negative

Gene Family Information

  • ID HOM05D006623
  • #Genes/#Species 121/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g100400.3.1
  • uniprot A0A3Q7EQA0
  • gene_id Solyc01g100400

Descriptions

  • Description Pseudouridine synthase (AHRD V3.3 *** A0A200PWH1_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
GOA Databasepseudouridine synthesis
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
GOA DatabaseRNA modification
GO:0009451
IEA
InterProRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
GOA Databasepseudouridine synthase activity
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006145 Pseudouridine synthase, RsuA/RluA-like
IPR020103 Pseudouridine synthase, catalytic domain superfamily
Mapman id Description
16.5.3.4 RNA processing.RNA modification.pseudouridylation.dual-specificity tRNA/rRNA pseudouridine synthase (RluA)