Gene: Solyc01g096200.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g096200.4
- Transcript Identifier Solyc01g096200.4.1
- Gene Type Coding gene
- Location SL4.0ch01 : 79552041-79561140 : negative
Gene Family Information
- ID HOM05D000716
- #Genes/#Species 805/97
- Phylogenetic origin
- ID ORTHO05D004822
- #Genes/#Species 170/69
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc01g096200.4.1
- uniprot A0A3Q7EMP8
- gene_id Solyc01g096200
Descriptions
- Description RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2W6T8_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007166 | IEA | GOA Database | cell surface receptor signaling pathway | |
| GO:0007166 | IEA | InterPro | cell surface receptor signaling pathway | |
| GO:0016567 | IEA | GOA Database | protein ubiquitination | |
| GO:0016567 | IEA | InterPro | protein ubiquitination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | IEA | GOA Database | ubiquitin-protein transferase activity | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005741 | IEA | GOA Database | mitochondrial outer membrane | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036537 | Adaptor protein Cbl, N-terminal domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| IPR016024 | Armadillo-type fold |
| IPR003613 | U box domain |
| IPR011989 | Armadillo-like helical |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR008808 | Powdery mildew resistance protein, RPW8 domain |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR000225 | Armadillo |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.2.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase |