Gene: Solyc01g087060.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g087060.4
  • Transcript Identifier Solyc01g087060.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 74243769-74248714 : negative

Gene Family Information

  • ID HOM05D000187
  • #Genes/#Species 2054/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g087060.4.1
  • uniprot A0A3Q7F2M3
  • gene_id Solyc01g087060

Descriptions

  • Description RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NQN4_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0046621
IEA
GOA Databasenegative regulation of organ growth
GO:0046621
IEA
InterPronegative regulation of organ growth
GO:0008285
ISO
PLAZA Integrative Orthologynegative regulation of cell population proliferation AT3G63530
GO:0048437
ISO
PLAZA Integrative Orthologyfloral organ development AT3G63530
GO:1900057
ISO
PLAZA Integrative Orthologypositive regulation of leaf senescence AT3G63530
GO:0051865
ISO
PLAZA Integrative Orthologyprotein autoubiquitination AT3G63530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IBA
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0031624
IBA
GOA Databaseubiquitin conjugating enzyme binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G63530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR033276 E3 ubiquitin-protein ligase BIG BROTHER
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.3.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.CTL-subclass ligase