Gene: Solyc01g081290.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g081290.4
  • Transcript Identifier Solyc01g081290.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 73108094-73115061 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g081290.4.1
  • uniprot A0A3Q7EI12
  • gene_id Solyc01g081290

Descriptions

  • Description Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3ALT8_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
InterProprotein phosphorylation
GO:0009451
IBA
GOA DatabaseRNA modification
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT4G18750
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT4G18750
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT4G18750
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT4G18750
GO:1900865
ISO
PLAZA Integrative Orthologychloroplast RNA modification AT4G18750

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004672
IEA
InterProprotein kinase activity
GO:0005524
IEA
InterProATP binding
GO:0003723
IBA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043231
IBA
GOA Databaseintracellular membrane-bounded organelle
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G18750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR011009 Protein kinase-like domain superfamily
IPR032867 DYW domain
IPR000719 Protein kinase domain
Mapman id Description
16.11.3.3.4.35 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF26)
18.4.5.6 Protein modification.phosphorylation.CAMK protein kinase superfamily.protein kinase (PEPRK)