Gene: Solyc01g080190.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc01g080190.3
Transcript Identifier Solyc01g080190.3.1
Gene Type Coding gene
Location SL4.0ch01 : 71982526-71984628 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D009507
#Genes/#Species 100/83
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid Solyc01g080190.3.1
uniprot A0A3Q7EHW7
gene_id Solyc01g080190

Descriptions

Short descriptions
Ortholog descriptions

Description Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A1U8E0X5_CAPAN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0080156	ISO	PLAZA Integrative Orthology	mitochondrial mRNA modification	AT5G19020

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT5G19020

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat

Mapman id	Description
16.11.3.3.4.13	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF18)