Gene: Solyc01g010860.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g010860.3
  • Transcript Identifier Solyc01g010860.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 6334205-6337776 : positive

Gene Family Information

  • ID HOM05D001668
  • #Genes/#Species 387/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g010860.3.1
  • uniprot A0A3Q7EAC6
  • gene_id Solyc01g010860

Descriptions

  • Description Sphinganine C(4)-monooxygenase 1 (AHRD V3.3 *** A0A2G3DFM4_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008610
IEA
GOA Databaselipid biosynthetic process
GO:0008610
IEA
InterProlipid biosynthetic process
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT1G69640
GO:0046520
ISO
PLAZA Integrative Orthologysphingoid biosynthetic process AT1G69640

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005506
IEA
GOA Databaseiron ion binding
GO:0005506
IEA
InterProiron ion binding
GO:0016491
IBA
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0000170
ISO
PLAZA Integrative Orthologysphingosine hydroxylase activity AT1G69640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IBA
IEA
GOA Databasemembrane
GO:0005789
IBA
GOA Databaseendoplasmic reticulum membrane
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G69640
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G69640

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006694 Fatty acid hydroxylase
Mapman id Description
5.4.4 Lipid metabolism.sphingolipid biosynthesis.sphingobase hydroxylase (SBH)