Gene: Solyc01g005940.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g005940.4
  • Transcript Identifier Solyc01g005940.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 624746-627944 : positive

Gene Family Information

  • ID HOM05D001875
  • #Genes/#Species 351/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g005940.4.1
  • uniprot A0A3Q7EQY3
  • gene_id Solyc01g005940

Descriptions

  • Description Phytoene synthase, chloroplastic (AHRD V3.3 *** A0A2G3DEK5_CAPCH),Pfam:PF00494
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009058
IEA
GOA Databasebiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process
GO:0016117
IBA
GOA Databasecarotenoid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004311
IEA
GOA Databasefarnesyltranstransferase activity
GO:0004311
IEA
InterProfarnesyltranstransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016740
IEA
InterProtransferase activity
GO:0016765
IEA
GOA Databasetransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016767
IBA
GOA Databasegeranylgeranyl-diphosphate geranylgeranyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033904 Trans-isoprenyl diphosphate synthases, head-to-head
IPR002060 Squalene/phytoene synthase
IPR008949 Isoprenoid synthase domain superfamily
IPR044843 Trans-isoprenyl diphosphate synthases, bacterial-type
Mapman id Description
9.1.6.1.1 Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.phytoene synthase (PSY)