Gene: Sed0016002

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0016002
  • Transcript Identifier Sed0016002.1
  • Gene Type Coding gene
  • Location LG05 : 34313803-34320015 : positive

Gene Family Information

  • ID HOM05D001060
  • #Genes/#Species 575/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0016002.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009584
IEA
InterProdetection of visible light
GO:0009585
IEA
InterProred, far-red light phototransduction
GO:0017006
IEA
InterProprotein-tetrapyrrole linkage
GO:0018298
IEA
InterProprotein-chromophore linkage
GO:0007165
IEA
InterProsignal transduction

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0009881
IEA
InterProphotoreceptor activity
GO:0042803
IEA
InterProprotein homodimerization activity
GO:0000155
IEA
InterProphosphorelay sensor kinase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR001294 Phytochrome
IPR035965 PAS domain superfamily
IPR003018 GAF domain
IPR012129 Phytochrome A/B/C/D/E
IPR003594 Histidine kinase/HSP90-like ATPase
IPR000014 PAS domain
IPR029016 GAF-like domain superfamily
IPR013515 Phytochrome, central region
IPR013654 PAS fold-2
IPR013767 PAS fold
IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR043150 Phytochrome, PHY domain
Mapman id Description
26.1.1.1 External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY)