Gene: Sed0006048
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0006048
- Transcript Identifier Sed0006048.1
- Gene Type Coding gene
- Location LG02 : 49950527-49951423 : negative
Gene Family Information
- ID HOM05D000117
- #Genes/#Species 2876/97
- Phylogenetic origin
- ID ORTHO05D000070
- #Genes/#Species 2531/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sed0006048.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT3G17600 |
| GO:0048367 | ISO | PLAZA Integrative Orthology | shoot system development | AT3G17600 |
| GO:0009630 | ISO | PLAZA Integrative Orthology | gravitropism | AT3G17600 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT4G14560 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT4G14560 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G14560 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G14560 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 11.2.2.2 | Phytohormone action.auxin.perception and signal transduction.transcriptional repressor (IAA/AUX) |