Gene: Sed0004493

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0004493
  • Transcript Identifier Sed0004493.1
  • Gene Type Coding gene
  • Location LG02 : 48440841-48442782 : positive

Gene Family Information

  • ID HOM05D000293
  • #Genes/#Species 1516/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0004493.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold Os03g0315400
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G49620
GO:1902074
ISO
PLAZA Integrative Orthologyresponse to salt AT5G49620
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated Os03g0315400
GO:1901002
ISO
PLAZA Integrative Orthologypositive regulation of response to salt stress Os03g0315400
GO:1902584
ISO
PLAZA Integrative Orthologypositive regulation of response to water deprivation Os03g0315400

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G49620
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G49620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os03g0315400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
IPR044676 MYB-like transcription factor EOBI/EOBII-like, plant
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)