Gene: Sed0003785
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0003785
- Transcript Identifier Sed0003785.10
- Gene Type Coding gene
- Location LG01 : 4320241-4323185 : negative
Gene Family Information
- ID HOM05D000707
- #Genes/#Species 812/95
- Phylogenetic origin
- ID ORTHO05D001462
- #Genes/#Species 403/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sed0003785.10
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT3G07650 |
| GO:0048579 | ISO | PLAZA Integrative Orthology | negative regulation of long-day photoperiodism, flowering | AT3G07650 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT3G07650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G48250 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G07650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G07650 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G48250 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000315 | B-box-type zinc finger |
| Mapman id | Description |
|---|---|
| 15.5.1.2 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-CO) |