Gene: Sed0003206
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0003206
- Transcript Identifier Sed0003206.1
- Gene Type Coding gene
- Location LG14 : 17889470-17893507 : negative
Gene Family Information
- ID HOM05D001054
- #Genes/#Species 576/100
- Phylogenetic origin
- ID ORTHO05D001607
- #Genes/#Species 382/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sed0003206.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT5G67380 |
| GO:0010332 | ISO | PLAZA Integrative Orthology | response to gamma radiation | AT5G67380 |
| GO:0016310 | ISO | PLAZA Integrative Orthology | phosphorylation | AT3G50000 |
| GO:0051726 | ISO | PLAZA Integrative Orthology | regulation of cell cycle | AT5G67380 |
| GO:0010225 | ISO | PLAZA Integrative Orthology | response to UV-C | AT5G67380 |
| GO:0006325 | ISO | PLAZA Integrative Orthology | chromatin organization | AT5G67380 |
| GO:0042752 | ISO | PLAZA Integrative Orthology | regulation of circadian rhythm | AT5G67380 |
| GO:2001020 | ISO | PLAZA Integrative Orthology | regulation of response to DNA damage stimulus | AT5G67380 |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT5G67380 |
| GO:0006468 | IEA | InterPro | protein phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016301 | ISO | PLAZA Integrative Orthology | kinase activity | AT5G67380 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G67380 |
| GO:0004672 | IEA | InterPro | protein kinase activity | |
| GO:0004674 | ISO | PLAZA Integrative Orthology | protein serine/threonine kinase activity | AT5G67380 |
| GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005956 | ISO | PLAZA Integrative Orthology | protein kinase CK2 complex | AT5G67380 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G67380 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G67380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 18.4.3.9.1 | Protein modification.phosphorylation.CMGC protein kinase superfamily.CK-II protein kinase heterodimer.catalytic subunit alpha |