Gene: Sed0001811
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0001811
- Transcript Identifier Sed0001811.1
- Gene Type Coding gene
- Location LG04 : 43326686-43327093 : negative
Gene Family Information
- ID HOM05D001117
- #Genes/#Species 550/94
- Phylogenetic origin
- ID ORTHO05D000930
- #Genes/#Species 548/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sed0001811.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT3G21150 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT3G21890 |
| GO:0009785 | ISO | PLAZA Integrative Orthology | blue light signaling pathway | AT3G21150 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT3G21890 |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT3G21890 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT3G21150 |
| GO:0010017 | ISO | PLAZA Integrative Orthology | red or far-red light signaling pathway | AT3G21150 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT3G21150 |
| GO:0010224 | ISO | PLAZA Integrative Orthology | response to UV-B | AT3G21890 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G21890 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G21150 |
| GO:0030674 | ISO | PLAZA Integrative Orthology | protein-macromolecule adaptor activity | AT4G15248 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G21150 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G21150 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000315 | B-box-type zinc finger |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |