Gene: Sc06g0002420
General Information
Structural Information
- Species Simmondsia chinensis
- Gene Identifier Sc06g0002420
- Transcript Identifier Sc06g0002420.01
- Gene Type Coding gene
- Location GWHAASQ00000006 : 4644412-4674947 : positive
Gene Family Information
- ID HOM05D001816
- #Genes/#Species 361/99
- Phylogenetic origin
- ID ORTHO05D002001
- #Genes/#Species 328/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sc06g0002420.01
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006419 | IEA | InterPro | alanyl-tRNA aminoacylation | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G50200 |
| GO:0043039 | ISO | PLAZA Homology (enrichment) | tRNA aminoacylation | HOM05D001816 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004813 | IEA | InterPro | alanine-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D001816 |
| GO:0004812 | ISO | PLAZA Homology (enrichment) | aminoacyl-tRNA ligase activity | HOM05D001816 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G50200 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G50200 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G50200 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR018162 | Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily |
| IPR002318 | Alanine-tRNA ligase, class IIc |
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR018163 | Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily |
| IPR018164 | Alanyl-tRNA synthetase, class IIc, N-terminal |
| Mapman id | Description |
|---|---|
| 17.2.1 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase |