Gene: SHI05891
General Information
Structural Information
- Species Sapria himalayana
- Gene Identifier SHI05891
- Transcript Identifier SHI05891-RA
- Gene Type Coding gene
- Location scaffold2_22354274 : 635482-650099 : positive
Gene Family Information
- ID HOM05D001007
- #Genes/#Species 602/100
- Phylogenetic origin
- ID ORTHO05D006705
- #Genes/#Species 139/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid SHI05891-RA
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1904278 | ISO | PLAZA Integrative Orthology | positive regulation of wax biosynthetic process | AT3G46960 |
| GO:0090065 | ISO | PLAZA Integrative Orthology | regulation of production of siRNA involved in RNA interference | AT3G46960 |
| GO:0006401 | ISO | PLAZA Homology (enrichment) | RNA catabolic process | HOM05D001007 |
| GO:0006813 | ISO | PLAZA Integrative Orthology | potassium ion transport | AT3G46960 |
| GO:0000292 | ISO | PLAZA Integrative Orthology | RNA fragment catabolic process | AT3G46960 |
| GO:0070478 | ISO | PLAZA Integrative Orthology | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay | AT3G46960 |
| GO:0016441 | ISO | PLAZA Integrative Orthology | posttranscriptional gene silencing | AT3G46960 |
| GO:0035864 | ISO | PLAZA Integrative Orthology | response to potassium ion | AT3G46960 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D001007 |
| GO:0005524 | ISO | PLAZA Homology (enrichment) | ATP binding | HOM05D001007 |
| GO:0003723 | ISO | PLAZA Homology (enrichment) | RNA binding | HOM05D001007 |
| GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | AT3G46960 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055087 | ISO | PLAZA Integrative Orthology | Ski complex | AT3G46960 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G46960 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G46960 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |