Gene: SGA_v2.0_scaffold90G27774

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold90G27774
  • Transcript Identifier SGA_v2.0_scaffold90T27774
  • Gene Type Coding gene
  • Location scaffold90 : 863131-867986 : negative

Gene Family Information

  • ID HOM05D000122
  • #Genes/#Species 2793/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Cyclic nucleotide-gated ion channel, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006811
IEA
InterProion transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0080027
ISO
PLAZA Integrative Orthologyresponse to herbivore AT3G17690

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005216
IEA
InterProion channel activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G17690
GO:0099604
ISO
PLAZA Integrative Orthologyligand-gated calcium channel activity AT3G17690

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G17690

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000595 Cyclic nucleotide-binding domain
IPR018490 Cyclic nucleotide-binding-like
IPR014710 RmlC-like jelly roll fold
IPR005821 Ion transport domain
Mapman id Description
24.3.2.4 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC)