Gene: SGA_v2.0_scaffold62G21621

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold62G21621
  • Transcript Identifier SGA_v2.0_scaffold62T21621
  • Gene Type Coding gene
  • Location scaffold62 : 1825925-1830088 : negative

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product ATP-dependent RNA helicase, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g110990.2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
InterProhelicase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000113
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc01g110990.2
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G26560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G26560
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G26560
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G26560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR012340 Nucleic acid-binding, OB-fold
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR007502 Helicase-associated domain
IPR022967 RNA-binding domain, S1
IPR011709 Domain of unknown function DUF1605
IPR003029 S1 domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated