Gene: SGA_v2.0_scaffold5G03011

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold5G03011
  • Transcript Identifier SGA_v2.0_scaffold5T03011
  • Gene Type Coding gene
  • Location scaffold5 : 3359447-3365069 : negative

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Dead box ATP-dependent RNA helicase, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G08620
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g095740.4
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G08620
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G08620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G08620
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc01g095740.4
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G08610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G08610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated