Gene: SGA_v2.0_scaffold4G02209
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold4G02209
- Transcript Identifier SGA_v2.0_scaffold4T02209
- Gene Type Coding gene
- Location scaffold4 : 2181990-2188806 : positive
Gene Family Information
- ID HOM05D001159
- #Genes/#Species 533/100
- Phylogenetic origin
- ID ORTHO05D001712
- #Genes/#Species 366/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product Transport family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0006888 | IEA | InterPro | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0090114 | ISO | PLAZA Homology (enrichment) | COPII-coated vesicle budding | HOM05D001159 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030127 | IEA | InterPro | COPII vesicle coat |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR037364 | Protein transport protein Sec23 |
| IPR036174 | Zinc finger, Sec23/Sec24-type superfamily |
| IPR006895 | Zinc finger, Sec23/Sec24-type |
| IPR036175 | Sec23/Sec24 helical domain superfamily |
| IPR012990 | Sec23/Sec24 beta-sandwich |
| IPR006896 | Sec23/Sec24, trunk domain |
| IPR007123 | Gelsolin-like domain |
| IPR006900 | Sec23/Sec24, helical domain |
| IPR036465 | von Willebrand factor A-like domain superfamily |
| IPR036180 | Gelsolin-like domain superfamily |
| Mapman id | Description |
|---|---|
| 22.1.1.1.3.1 | Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec23 |