Gene: SGA_v2.0_scaffold337G49186
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold337G49186
- Transcript Identifier SGA_v2.0_scaffold337T49186
- Gene Type Coding gene
- Location scaffold337 : 170742-175150 : positive
Gene Family Information
- ID HOM05D001027
- #Genes/#Species 591/99
- Phylogenetic origin
- ID ORTHO05D000844
- #Genes/#Species 587/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product telomere repeat binding factor 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006334 | ISO | PLAZA Homology (enrichment) | nucleosome assembly | HOM05D001027 |
| GO:0006357 | ISO | PLAZA Integrative Orthology | regulation of transcription by RNA polymerase II | AT1G49950 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003691 | IEA | InterPro | double-stranded telomeric DNA binding | |
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D001027 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT1G49950 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G49950 |
| GO:1990841 | ISO | PLAZA Integrative Orthology | promoter-specific chromatin binding | AT1G49950 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G49950 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G49950 |
| GO:0032991 | ISO | PLAZA Integrative Orthology | protein-containing complex | AT1G49950 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G49950 |
| GO:0000786 | ISO | PLAZA Homology (enrichment) | nucleosome | HOM05D001027 |
| GO:0000785 | ISO | PLAZA Integrative Orthology | chromatin | AT1G49950 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |