Gene: SGA_v2.0_scaffold2G01181

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold2G01181
  • Transcript Identifier SGA_v2.0_scaffold2T01181
  • Gene Type Coding gene
  • Location scaffold2 : 3438241-3439809 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Pentatricopeptide repeat-containing protein, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT4G25270
GO:0009451
ISO
PLAZA Integrative OrthologyRNA modification AT4G25270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G25270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.4.1.5 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (OTP70)