Gene: SGA_v2.0_scaffold273G46396

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold273G46396
  • Transcript Identifier SGA_v2.0_scaffold273T46396
  • Gene Type Coding gene
  • Location scaffold273 : 36235-44233 : positive

Gene Family Information

  • ID HOM05D002649
  • #Genes/#Species 259/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Pentatricopeptide repeat-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT1G15480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G80270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G80270
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G80270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR009000 Translation protein, beta-barrel domain superfamily
IPR002885 Pentatricopeptide repeat
IPR001780 Ribosomal protein L35A
IPR038661 Ribosomal protein L35A superfamily
Mapman id Description
16.11.3.3.4.20 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (POCO)
17.1.2.1.36 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL35a