Gene: SGA_v2.0_scaffold270G46309
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold270G46309
- Transcript Identifier SGA_v2.0_scaffold270T46309
- Gene Type Coding gene
- Location scaffold270 : 66388-69058 : positive
Gene Family Information
- ID HOM05D000575
- #Genes/#Species 966/99
- Phylogenetic origin
- ID ORTHO05D004524
- #Genes/#Species 178/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Serine hydroxymethyltransferase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019264 | IEA | InterPro | glycine biosynthetic process from serine | |
| GO:0035999 | IEA | InterPro | tetrahydrofolate interconversion | |
| GO:0010197 | ISO | PLAZA Integrative Orthology | polar nucleus fusion | AT4G13890 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT4G13890 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT4G13930 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT4G13930 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004372 | IEA | InterPro | glycine hydroxymethyltransferase activity | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G13930 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G13930 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G13930 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G13930 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001085 | Serine hydroxymethyltransferase |
| IPR039429 | Serine hydroxymethyltransferase-like domain |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |