Gene: SGA_v2.0_scaffold24G10558

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold24G10558
  • Transcript Identifier SGA_v2.0_scaffold24T10558
  • Gene Type Coding gene
  • Location scaffold24 : 1912345-1916015 : positive

Gene Family Information

  • ID HOM05D002398
  • #Genes/#Species 283/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Protease-associated (PA) RING/U-box zinc finger family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
ISO
PLAZA Integrative Orthologyintracellular protein transport AT5G66160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G66160
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G66160
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT5G66160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT5G66160
GO:0000306
ISO
PLAZA Integrative Orthologyextrinsic component of vacuolar membrane AT5G66160
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G66160
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT1G71980
GO:0000326
ISO
PLAZA Integrative Orthologyprotein storage vacuole AT1G71980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044744 ZNRF4 /RNF13/RNF167, PA domain
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR003137 PA domain
Mapman id Description
22.3.3.2 Vesicle trafficking.post-Golgi trafficking.vacuolar protein sorting.storage vacuole sorting receptor (RMR)