Gene: SGA_v2.0_scaffold16G07797

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold16G07797
  • Transcript Identifier SGA_v2.0_scaffold16T07797
  • Gene Type Coding gene
  • Location scaffold16 : 2282236-2288599 : positive

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product RNA helicase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT1G26370

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
InterProhelicase activity
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000113

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G26370
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G26370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR007502 Helicase-associated domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011709 Domain of unknown function DUF1605
IPR003593 AAA+ ATPase domain
Mapman id Description
16.2.7.1.7 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp22)