Gene: SGA_v2.0_scaffold151G36697

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold151G36697
  • Transcript Identifier SGA_v2.0_scaffold151T36697
  • Gene Type Coding gene
  • Location scaffold151 : 28691-31258 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Pentatricopeptide repeat-containing family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G22690
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT3G22690
GO:0048564
ISO
PLAZA Integrative Orthologyphotosystem I assembly AT3G22690
GO:0009451
ISO
PLAZA Integrative OrthologyRNA modification AT3G22690
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT3G22690
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT3G22690
GO:0010027
ISO
PLAZA Integrative Orthologythylakoid membrane organization AT3G22690

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G22690

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
Mapman id Description
16.11.3.3.4.40 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (YS1)