Gene: SEGI_41008

General Information

Structural Information

  • Species Sequoiadendron giganteum
  • Gene Identifier SEGI_41008
  • Transcript Identifier SEGI_41008.1
  • Gene Type Coding gene
  • Location chr9 : 109648883-109697279 : positive

Gene Family Information

  • ID HOM05D001141
  • #Genes/#Species 542/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SEGI_41008.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016575
IEA
InterProhistone deacetylation
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT4G38130
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G38130
GO:1901001
ISO
PLAZA Integrative Orthologynegative regulation of response to salt stress AT4G38130
GO:0016573
ISO
PLAZA Integrative Orthologyhistone acetylation AT4G38130
GO:0009861
ISO
PLAZA Integrative Orthologyjasmonic acid and ethylene-dependent systemic resistance AT4G38130
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G38130
GO:1902459
ISO
PLAZA Integrative Orthologypositive regulation of stem cell population maintenance AT4G38130
GO:2000026
ISO
PLAZA Integrative Orthologyregulation of multicellular organismal development AT4G38130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004407
IEA
InterProhistone deacetylase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G38130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G38130
GO:0000118
ISO
PLAZA Integrative Orthologyhistone deacetylase complex AT4G38130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003084 Histone deacetylase
IPR023801 Histone deacetylase domain
IPR037138 Histone deacetylase domain superfamily
IPR000286 Histone deacetylase family
IPR023696 Ureohydrolase domain superfamily
Mapman id Description
50.3.5 Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond