Gene: SEGI_05233
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_05233
- Transcript Identifier SEGI_05233.1
- Gene Type Coding gene
- Location chr3 : 134358780-134363629 : positive
Gene Family Information
- ID HOM05D000121
- #Genes/#Species 2804/100
- Phylogenetic origin
- ID ORTHO05D000102
- #Genes/#Species 2078/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid SEGI_05233.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0051707 | ISO | PLAZA Integrative Orthology | response to other organism | AT3G13100 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0140359 | IEA | InterPro | ABC-type transporter activity | |
| GO:0042626 | ISO | PLAZA Integrative Orthology | ATPase-coupled transmembrane transporter activity | AT3G13080 |
| GO:0015431 | ISO | PLAZA Integrative Orthology | ABC-type glutathione S-conjugate transporter activity | AT3G13080 |
| GO:0010290 | ISO | PLAZA Integrative Orthology | chlorophyll catabolite transmembrane transporter activity | AT3G13080 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G60160 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT3G13080 |
| GO:0000325 | ISO | PLAZA Integrative Orthology | plant-type vacuole | AT3G13080 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT3G13080 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G13080 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036640 | ABC transporter type 1, transmembrane domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003439 | ABC transporter-like, ATP-binding domain |
| IPR011527 | ABC transporter type 1, transmembrane domain |
| IPR003593 | AAA+ ATPase domain |
| IPR044726 | ABC transporter C family, six-transmembrane helical domain 2 |
| IPR044746 | ABC transporter C family, six-transmembrane helical domain 1 |
| Mapman id | Description |
|---|---|
| 24.1.3.1.2 | Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter |