Gene: SEGI_02038
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_02038
- Transcript Identifier SEGI_02038.1
- Gene Type Coding gene
- Location HRSCAF_3949 : 3252-10353 : positive
Gene Family Information
- ID HOM05D000743
- #Genes/#Species 785/85
- Phylogenetic origin
- ID ORTHO05D000580
- #Genes/#Species 764/85
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid SEGI_02038.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046034 | IEA | InterPro | ATP metabolic process | |
| GO:1902600 | IEA | InterPro | proton transmembrane transport | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | ATCG00120 |
| GO:0006176 | ISO | PLAZA Integrative Orthology | dATP biosynthetic process from ADP | ATCG00120 |
| GO:0015986 | ISO | PLAZA Homology (enrichment) | ATP synthesis coupled proton transport | HOM05D000743 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00120 |
| GO:0046961 | ISO | PLAZA Integrative Orthology | proton-transporting ATPase activity, rotational mechanism | ATCG00120 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010319 | ISO | PLAZA Integrative Orthology | stromule | ATCG00120 |
| GO:0009544 | ISO | PLAZA Integrative Orthology | chloroplast ATP synthase complex | ATCG00120 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily |
| IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain |
| IPR035921 | F/V-ATP synthase subunit C superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR038662 | F1F0 ATP synthase subunit C superfamily |
| IPR023366 | ATP synthase subunit alpha, N-terminal domain-like superfamily |
| IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |