Gene: RcHm_v2.0_Chr6g0290491
General Information
Structural Information
- Species Rosa chinensis
- Gene Identifier RcHm_v2.0_Chr6g0290491
- Transcript Identifier RcHm_v2.0_Chr6g0290491
- Gene Type Coding gene
- Location RcHm_v2.0_Chr6 : 53473594-53474654 : positive
Gene Family Information
- ID HOM05D000489
- #Genes/#Species 1089/94
- Phylogenetic origin
- ID ORTHO05D000372
- #Genes/#Species 1038/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006869 | IEA | InterPro | lipid transport | |
| GO:0015908 | ISO | PLAZA Integrative Orthology | fatty acid transport | AT2G48130 |
| GO:0010214 | ISO | PLAZA Integrative Orthology | seed coat development | AT2G48130 |
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT2G48130 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008289 | IEA | InterPro | lipid binding | |
| GO:0005319 | ISO | PLAZA Integrative Orthology | lipid transporter activity | AT2G48130 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G48130 |
| GO:0031225 | ISO | PLAZA Integrative Orthology | anchored component of membrane | AT2G48130 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR043325 | Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein |
| IPR000528 | Plant non-specific lipid-transfer protein/Par allergen |
| IPR036312 | Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily |
| IPR016140 | Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain |
| Mapman id | Description |
|---|---|
| 21.4.1.1.4 | Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.arabinogalactan-protein activities.Xylogen-type arabinogalactan protein (XYP/XYLP) |