Gene: RcHm_v2.0_Chr5g0051831

General Information

Structural Information

Species Rosa chinensis
Gene Identifier RcHm_v2.0_Chr5g0051831
Transcript Identifier RcHm_v2.0_Chr5g0051831
Gene Type Coding gene
Location RcHm_v2.0_Chr5 : 53192141-53194171 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002502
#Genes/#Species 272/99
Phylogenetic origin

ID ORTHO05D003592
#Genes/#Species 213/99
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010118	ISO	PLAZA Integrative Orthology	stomatal movement	AT1G10300
GO:0009846	ISO	PLAZA Integrative Orthology	pollen germination	AT3G23860
GO:0010584	ISO	PLAZA Integrative Orthology	pollen exine formation	AT3G23860
GO:1900426	ISO	PLAZA Integrative Orthology	positive regulation of defense response to bacterium	AT1G10300
GO:0080092	ISO	PLAZA Integrative Orthology	regulation of pollen tube growth	AT3G23860

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005525	IEA	InterPro	GTP binding
GO:0003924	ISO	PLAZA Integrative Orthology	GTPase activity	AT1G10300
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G50920

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G23860
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT3G23860

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR012973	NOG, C-terminal
IPR010674	Nucleolar GTP-binding protein 1, Rossman-fold domain
IPR006073	GTP binding domain
IPR041623	NOG1, N-terminal helical domain
IPR024926	Nucleolar GTP-binding protein 1

Mapman id	Description
17.1.2.2.1.14	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.regulatory GTPase (NOG1)