Gene: RcHm_v2.0_Chr3g0469331

General Information

Structural Information

Species Rosa chinensis
Gene Identifier RcHm_v2.0_Chr3g0469331
Transcript Identifier RcHm_v2.0_Chr3g0469331
Gene Type Coding gene
Location RcHm_v2.0_Chr3 : 15068048-15069196 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000218
#Genes/#Species 1867/96
Phylogenetic origin

ID ORTHO05D000125
#Genes/#Species 1823/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010224	ISO	PLAZA Integrative Orthology	response to UV-B	AT5G03240
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT5G20620

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT5G20620

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005618	ISO	PLAZA Integrative Orthology	cell wall	AT3G09790
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT5G37640
GO:0005774	ISO	PLAZA Integrative Orthology	vacuolar membrane	AT5G37640
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT3G09790
GO:0005622	ISO	PLAZA Integrative Orthology	intracellular anatomical structure	AT3G09790

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000626	Ubiquitin-like domain
IPR029071	Ubiquitin-like domain superfamily
IPR019956	Ubiquitin domain

Mapman id	Description
19.2.2.1.1	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ)