Gene: Pp3c9_19080

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c9_19080
  • Transcript Identifier Pp3c9_19080V3.3
  • Gene Type Coding gene
  • Location Chr09 : 12835157-12837562 : negative

Gene Family Information

  • ID HOM05D000095
  • #Genes/#Species 3348/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c9_19080V3.3
  • pacid 32912526
  • alias Phpat.009G073700
  • alias Pp1s89_108V6
  • alias Phypa_131614
  • uniprot A0A2K1K3S7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009723
IBA
GOA Databaseresponse to ethylene
GO:0009733
IBA
GOA Databaseresponse to auxin
GO:0009739
IBA
GOA Databaseresponse to gibberellin
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT1G70000
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G56840
GO:0031540
ISO
PLAZA Integrative Orthologyregulation of anthocyanin biosynthetic process AT1G70000

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G70000
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G74840
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT1G70000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G70000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
IPR006447 Myb domain, plants
IPR001005 SANT/Myb domain
Mapman id Description
15.5.2.2 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related)