Gene: Pp3c7_26040

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c7_26040
  • Transcript Identifier Pp3c7_26040V3.1
  • Gene Type Coding gene
  • Location Chr07 : 17385004-17388149 : positive

Gene Family Information

  • ID HOM05D002125
  • #Genes/#Species 314/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c7_26040V3.1
  • pacid 32922993
  • alias Pp1s97_169V6
  • alias Phpat.007G101100
  • alias Phypa_186728
  • uniprot A0A2K1KD44

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031146
IBA
GOA DatabaseSCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0010044
ISO
PLAZA Integrative Orthologyresponse to aluminum ion AT5G27920
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G01720
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT5G01720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:1990756
ISO
PLAZA Integrative Orthologyubiquitin ligase-substrate adaptor activity AT5G27920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019005
IBA
GOA DatabaseSCF ubiquitin ligase complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G27920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001611 Leucine-rich repeat
IPR006553 Leucine-rich repeat, cysteine-containing subtype
IPR032675 Leucine-rich repeat domain superfamily
Mapman id Description
19.2.2.8.1.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (RAE-like)