Gene: Pp3c6_7790
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c6_7790
- Transcript Identifier Pp3c6_7790V3.3
- Gene Type Coding gene
- Location Chr06 : 4752589-4754304 : negative
Gene Family Information
- ID HOM05D002398
- #Genes/#Species 283/96
- Phylogenetic origin
- ID ORTHO05D002817
- #Genes/#Species 260/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c6_7790V3.3
- pacid 32975292
- alias Pp1s282_31V6
- alias Phpat.006G028100
- alias Phypa_95538
- uniprot A0A2K1KES3
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | ISO | PLAZA Integrative Orthology | intracellular protein transport | AT5G66160 |
| GO:0006511 | IBA | GOA Database | ubiquitin-dependent protein catabolic process | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0016567 | IEA | GOA Database | protein ubiquitination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | AT5G66160 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G66160 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G66160 |
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0061630 | IBA | GOA Database | ubiquitin protein ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G66160 |
| GO:0000326 | ISO | PLAZA Integrative Orthology | protein storage vacuole | AT1G71980 |
| GO:0000139 | ISO | PLAZA Integrative Orthology | Golgi membrane | AT1G71980 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT5G66160 |
| GO:0000306 | ISO | PLAZA Integrative Orthology | extrinsic component of vacuolar membrane | AT5G66160 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005773 | IEA | GOA Database | vacuole | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.3.2 | Vesicle trafficking.post-Golgi trafficking.vacuolar protein sorting.storage vacuole sorting receptor (RMR) |