Gene: Pp3c5_1920

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_1920
  • Transcript Identifier Pp3c5_1920V3.2
  • Gene Type Coding gene
  • Location Chr05 : 1216161-1217117 : positive

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_1920V3.2
  • pacid 32955184
  • alias Phpat.005G006200
  • alias Phypa_232280
  • alias Pp1s72_104V6
  • uniprot A9SF28

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
GOA Databaseprotein ubiquitination
GO:0019941
IBA
GOA Databasemodification-dependent protein catabolic process
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G03240
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G20620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0031625
IBA
GOA Databaseubiquitin protein ligase binding
GO:0031386
IBA
GOA Databaseprotein tag
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G20620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
IBA
GOA Databasenucleus
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G37640
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G37640
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G37640
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G03240
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT1G55060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029071 Ubiquitin-like domain superfamily
IPR019956 Ubiquitin domain
IPR000626 Ubiquitin-like domain
Mapman id Description
19.2.2.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ)