Gene: Pp3c4_19000

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c4_19000
  • Transcript Identifier Pp3c4_19000V3.2
  • Gene Type Coding gene
  • Location Chr04 : 13022286-13022902 : negative

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c4_19000V3.2
  • pacid 32919514
  • alias Phypa_159452
  • alias Pp1s13_40V6
  • alias Phpat.004G072200
  • uniprot A9RJI9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation
GO:0016567
IBA
GOA Databaseprotein ubiquitination
GO:0019941
IBA
GOA Databasemodification-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0005515
IEA
InterProprotein binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0031625
IBA
GOA Databaseubiquitin protein ligase binding
GO:0031386
IBA
GOA Databaseprotein tag

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002906 Ribosomal protein S27a
IPR000626 Ubiquitin-like domain
IPR019956 Ubiquitin domain
IPR029071 Ubiquitin-like domain superfamily
IPR011332 Zinc-binding ribosomal protein
IPR038582 S27a-like superfamily
Mapman id Description
17.1.3.1.29 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS27a