Gene: Pp3c3_27940
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c3_27940
- Transcript Identifier Pp3c3_27940V3.2
- Gene Type Coding gene
- Location Chr03 : 18928921-18931304 : negative
Gene Family Information
- ID HOM05D000081
- #Genes/#Species 3710/99
- Phylogenetic origin
- ID ORTHO05D000036
- #Genes/#Species 3245/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c3_27940V3.2
- pacid 32942000
- alias Phypa_18161
- alias Phpat.003G110500
- alias Pp1s157_29V6
- uniprot A0A2K1KWE6
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009788 | ISO | PLAZA Integrative Orthology | negative regulation of abscisic acid-activated signaling pathway | Os01g0826400 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT2G38470 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT2G38470 |
| GO:0009863 | ISO | PLAZA Integrative Orthology | salicylic acid mediated signaling pathway | AT2G04880 |
| GO:0009961 | ISO | PLAZA Integrative Orthology | response to 1-aminocyclopropane-1-carboxylic acid | AT4G26640 |
| GO:0009846 | ISO | PLAZA Integrative Orthology | pollen germination | AT4G26440 |
| GO:1900425 | ISO | PLAZA Integrative Orthology | negative regulation of defense response to bacterium | AT1G13960 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT2G38470 |
| GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | AT1G13960 |
| GO:0009942 | ISO | PLAZA Integrative Orthology | longitudinal axis specification | AT5G56270 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT4G26640 |
| GO:0009938 | ISO | PLAZA Integrative Orthology | negative regulation of gibberellic acid mediated signaling pathway | Os01g0826400 |
| GO:0010508 | ISO | PLAZA Integrative Orthology | positive regulation of autophagy | AT2G38470 |
| GO:0009739 | ISO | PLAZA Integrative Orthology | response to gibberellin | Os01g0826400 |
| GO:0070370 | ISO | PLAZA Integrative Orthology | cellular heat acclimation | AT5G07100 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | Os01g0826400 |
| GO:0030010 | ISO | PLAZA Integrative Orthology | establishment of cell polarity | AT5G56270 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT2G38470 |
| GO:0031347 | ISO | PLAZA Integrative Orthology | regulation of defense response | AT3G01080 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT4G26640 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:1900150 | ISO | PLAZA Integrative Orthology | regulation of defense response to fungus | AT1G13960 |
| GO:0010120 | ISO | PLAZA Integrative Orthology | camalexin biosynthetic process | AT2G38470 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT2G38470 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT4G26440 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT1G13960 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT1G13960 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc04g056360.4 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT4G26440 |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT2G38470 |
| GO:0034605 | ISO | PLAZA Integrative Orthology | cellular response to heat | AT5G07100 |
| GO:0009627 | ISO | PLAZA Integrative Orthology | systemic acquired resistance | AT2G38470 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT2G04880 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G26440 |
| GO:0043565 | IEA | GOA Database | sequence-specific DNA binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G26440 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.22.1 | RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY) |