Gene: Pp3c3_20320

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c3_20320
  • Transcript Identifier Pp3c3_20320V3.2
  • Gene Type Coding gene
  • Location Chr03 : 13920638-13922970 : negative

Gene Family Information

  • ID HOM05D000131
  • #Genes/#Species 2694/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c3_20320V3.2
  • pacid 32945103
  • alias Phpat.003G079700
  • alias Pp1s204_112V6
  • alias Phypa_143571
  • uniprot A0A2K1KV92

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045490
IEA
GOA Databasepectin catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030570
IEA
GOA Databasepectate lyase activity
GO:0030570
IEA
InterPropectate lyase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045032 Pectin lyase family
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
IPR002022 Pectate lyase
IPR018082 AmbAllergen
Mapman id Description
21.3.5.2 Cell wall organisation.pectin.modification and degradation.pectate lyase