Gene: Pp3c3_13140
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c3_13140
- Transcript Identifier Pp3c3_13140V3.2
- Gene Type Coding gene
- Location Chr03 : 9229714-9234532 : negative
Gene Family Information
- ID HOM05D000492
- #Genes/#Species 1080/100
- Phylogenetic origin
- ID ORTHO05D000499
- #Genes/#Species 852/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c3_13140V3.2
- pacid 32943180
- alias Pp1s161_112V6
- alias Phpat.003G049700
- alias Phypa_139906
- uniprot A9T417
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061025 | ISO | PLAZA Integrative Orthology | membrane fusion | AT5G08080 |
| GO:0048278 | IBA | GOA Database | vesicle docking | |
| GO:0006886 | IBA IEA | GOA Database | intracellular protein transport | |
| GO:0006887 | IBA | GOA Database | exocytosis | |
| GO:0006906 | IBA | GOA Database | vesicle fusion | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000149 | IBA | GOA Database | SNARE binding | |
| GO:0005484 | IBA IEA | GOA Database | SNAP receptor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IBA IEA | GOA Database | integral component of membrane | |
| GO:0009504 | ISO | PLAZA Integrative Orthology | cell plate | AT5G08080 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G08080 |
| GO:0031201 | IBA | GOA Database | SNARE complex | |
| GO:0005886 | IBA | GOA Database | plasma membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0012505 | IBA | GOA Database | endomembrane system |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.5.1.1.1 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP1-group component |