Gene: Pp3c2_11210

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c2_11210
Transcript Identifier Pp3c2_11210V3.2
Gene Type Coding gene
Location Chr02 : 7517064-7521715 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001480
#Genes/#Species 429/100
Phylogenetic origin

ID ORTHO05D001331
#Genes/#Species 430/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

name Pp3c2_11210V3.2
pacid 32937059
alias Pp1s84_280V6
alias Phpat.002G049800
alias Phypa_165271
uniprot A0A2K1L128

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006396	IEA	GOA Database	RNA processing
GO:0006396	IEA	InterPro	RNA processing

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003723	IEA	GOA Database	RNA binding
GO:0003723	IEA	InterPro	RNA binding
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G43970

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	GOA Database	nucleus
GO:0005634	IEA	InterPro	nucleus
GO:1990904	IEA	GOA Database	ribonucleoprotein complex
GO:1990904	IEA	InterPro	ribonucleoprotein complex

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR002344	Lupus La protein
IPR035979	RNA-binding domain superfamily
IPR034878	Plant La-related protein, RNA recognition motif
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR036390	Winged helix DNA-binding domain superfamily
IPR006630	La-type HTH domain

Mapman id	Description
35.1	not assigned.annotated