Gene: Pp3c27_7320

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c27_7320
  • Transcript Identifier Pp3c27_7320V3.1
  • Gene Type Coding gene
  • Location Chr27 : 4362245-4369886 : positive

Gene Family Information

  • ID HOM05D001816
  • #Genes/#Species 361/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c27_7320V3.1
  • pacid 32951371
  • alias Pp1s164_16V6
  • alias Phypa_140193
  • alias Phpat.027G029300
  • uniprot A0A2K1IB12

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G50200
GO:0043039
IEA
GOA DatabasetRNA aminoacylation
GO:0043039
IEA
InterProtRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation
GO:0006419
IEA
GOA Databasealanyl-tRNA aminoacylation
GO:0006419
IEA
InterProalanyl-tRNA aminoacylation
GO:0070143
IEA
GOA Databasemitochondrial alanyl-tRNA aminoacylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0000049
IEA
GOA DatabasetRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0004813
IEA
GOA Databasealanine-tRNA ligase activity
GO:0004813
IEA
InterProalanine-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G50200
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G50200
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009000 Translation protein, beta-barrel domain superfamily
IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily
IPR002318 Alanine-tRNA ligase, class IIc
IPR012947 Threonyl/alanyl tRNA synthetase, SAD
IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal
IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
IPR003156 DHHA1 domain
Mapman id Description
17.2.1 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase