Gene: Pp3c25_6520

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c25_6520
  • Transcript Identifier Pp3c25_6520V3.1
  • Gene Type Coding gene
  • Location Chr25 : 4372189-4374412 : negative

Gene Family Information

  • ID HOM05D002398
  • #Genes/#Species 283/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c25_6520V3.1
  • pacid 32979042
  • alias Phpat.025G024500
  • alias Phypa_213315
  • alias Pp1s88_138V6
  • uniprot A0A2K1IE27

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006886
ISO
PLAZA Integrative Orthologyintracellular protein transport AT5G66160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G66160
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G66160
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT5G66160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0005773
IEA
GOA Databasevacuole
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT5G66160
GO:0000306
ISO
PLAZA Integrative Orthologyextrinsic component of vacuolar membrane AT5G66160
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G66160
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT1G71980
GO:0000326
ISO
PLAZA Integrative Orthologyprotein storage vacuole AT1G71980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR003137 PA domain
IPR044744 ZNRF4 /RNF13/RNF167, PA domain
IPR001841 Zinc finger, RING-type
Mapman id Description
22.3.3.2 Vesicle trafficking.post-Golgi trafficking.vacuolar protein sorting.storage vacuole sorting receptor (RMR)