Gene: Pp3c24_4890

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c24_4890
  • Transcript Identifier Pp3c24_4890V3.1
  • Gene Type Coding gene
  • Location Chr24 : 3407693-3411584 : negative

Gene Family Information

  • ID HOM05D002990
  • #Genes/#Species 230/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c24_4890V3.1
  • pacid 32909444
  • alias Pp1s18_1V6
  • alias Phpat.024G016300
  • alias Phypa_204046
  • uniprot A9RMY5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006890
IBA
IEA
GOA Databaseretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006890
IEA
InterProretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006888
IBA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0051645
IBA
GOA DatabaseGolgi localization
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G05010
GO:0005829
IBA
GOA Databasecytosol
GO:0030126
IBA
IEA
GOA DatabaseCOPI vesicle coat
GO:0030126
IEA
InterProCOPI vesicle coat
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0030663
IEA
GOA DatabaseCOPI-coated vesicle membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036168 AP-2 complex subunit mu, C-terminal superfamily
IPR028565 Mu homology domain
IPR027059 Coatomer delta subunit
IPR011012 Longin-like domain superfamily
Mapman id Description
22.2.1.1.4.3 Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit delta